General Information

    • DRAMP ID

    • DRAMP04589

    • Peptide Name

    • Cod cathelicidin

    • Source

    • Gadus morhua

    • Family

    • Not found

    • Gene

    • Not found

    • Sequence

    • SRSGRGSGKGGRGGSRGSSGSRGSKGPSGSRGSSGSRGSKGSRGGRSGRGSTIAGNGNRNNGGTRTA

    • Sequence Length

    • 67

    • UniProt Entry

    • No entry found

    • Protein Existence

    • Not found

Activity Information

    • Biological Activity

    • Antimicrobial

    • Target Organism

    • No MICs found in DRAMP database

    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry

    • Cytotoxicity

      • Not included yet

    • Binding Target

    • Not found

Structure Information

    • Linear/Cyclic

    • Not included yet

    • N-terminal Modification

    • Not included yet

    • C-terminal Modification

    • Not included yet

    • Nonterminal Modifications and Unusual Amino Acids

    • Not included yet

    • Stereochemistry

    • Not included yet

    • Structure

    • Not found

    • Structure Description

    • Not found

    • Helical Wheel Diagram

    • DRAMP04589 helical wheel diagram

    • PDB ID

    • None

    • Predicted Structure

    • There is no predicted structure for DRAMP04589.

Physicochemical Information

    • Formula

    • C234H412N110O92

    • Absent Amino Acids

    • CDEFHLMQVWY

    • Common Amino Acids

    • G

    • Mass

    • 6238.53

    • PI

    • 13.04

    • Basic Residues

    • 15

    • Acidic Residues

    • 0

    • Hydrophobic Residues

    • 3

    • Net Charge

    • +15

    • Boman Index

    • -256.66

    • Hydrophobicity

    • -1.47

    • Aliphatic Index

    • 8.81

    • Half Life

      • Mammalian:1.9 hour
      • Yeast:>20 hour
      • E.coli:>10 hour

    • Extinction Coefficient Cystines

    • 0

    • Absorbance 280nm

    • 0

    • Polar Residues

    • 48

DRAMP04589

DRAMP04589 chydropathy plot

Comments Information

    • Comment

    • No comments found on DRAMP database

Literature Information

  • ·Literature 1

    • Title

    • Cod cathelicidin: Isolation of the mature peptide, cleavage site characterisation and developmental expression.

    • Reference

    • Dev Comp Immunol. 2011 Mar;35(3):296-303.

    • Author

    • Broekman DC, Frei DM, Gylfason GA, Steinarsson A, Jörnvall H, Agerberth B, Gudmundsson GH, Maier VH.