General Information
-
DRAMP ID
- DRAMP04663
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Peptide Name
- HPA3NT3-A1 (HPA3NT3 peptide analogs)
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Source
- Helicobacter pylori
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Family
- Not found
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Gene
- Not found
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Sequence
- AKRLKKLAKKIWKWL
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Sequence Length
- 15
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UniProt Entry
- No entry found
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Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
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Target Organism
-
- [Ref.22982494] Gram-positive bacteria : Staphylococcus aureus(MIC=16 μM), Listeria monocytogenes(MIC=16 μM), Staphylococcus epidermidis(MIC=8 μM), Bacillus subtilis(MIC=8 μM);
- Gram-negative bacteria : Escherichia coli(MIC=32 μM), Pseudomonas aeruginosa(MIC=32 μM), Primula vulgaris(MIC=8-16 μM), Salmonella typhimurium(MIC=8 μM);
- Fungi : Candida albicans(MIC=16 μM), Trichosporon beigelii(MIC>128 μM), Aspergillus awamori(MIC=64 μM), Aspergillus flavus(MIC=64 μM), Aspergillus fumigatus(MIC=16 μM), Aspergillus parasiticus(MIC=16 μM)
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Hemolytic Activity
-
- [Ref.22982494] 20.9% hemolysis at 250 μM against human red blood cells
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Cytotoxicity
-
- Not included yet
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
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N-terminal Modification
- Not included yet
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C-terminal Modification
- Not included yet
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Nonterminal Modifications and Unusual Amino Acids
- Not included yet
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Stereochemistry
- Not included yet
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Structure
- Not found
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Structure Description
- Not found
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Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- There is no predicted structure for DRAMP04663.
Physicochemical Information
-
Formula
- C94H160N26O16
Absent Amino Acids
- CDEFGHMNPQSTVY
Common Amino Acids
- K
Mass
- 1910.47
PI
- 11.43
Basic Residues
- 7
Acidic Residues
- 0
Hydrophobic Residues
- 8
Net Charge
- +7
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Boman Index
- -20.26
Hydrophobicity
- -0.68
Aliphatic Index
- 117.33
Half Life
-
- Mammalian:4.4 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 11000
Absorbance 280nm
- 785.71
Polar Residues
- 0
DRAMP04663
Comments Information
Function
- Antibacterial activity against Gram-positive bacteria and Gram-negative bacteria. Antifungal activity against Candida albicans, Trichosporon beigelli, Aspergillus awamori, Aspergillus flavus, Aspergillus fumigatus, Aspergillus parasiticus
Literature Information
- ·Literature 1
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Title
- Antimicrobial HPA3NT3 peptide analogs: Placement of aromatic rings and positive charges are key determinants for cell selectivity and mechanism of action.
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Pubmed ID
- 22982494
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Reference
- Biochim Biophys Acta. 2013 Feb;1828(2):443-454. doi: 10.1016/j.bbamem.2012.09.005
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Author
- Lee JK, Park SC, Hahm KS, Park Y.