General Information
-
DRAMP ID
- DRAMP04669
-
Peptide Name
- Protamine y1
-
Source
- Thunnus thynnus
-
Family
- Not found
-
Gene
- Not found
-
Sequence
- ARRRRSSSRPIRRRRPRRRTTRRRRGARRRR
-
Sequence Length
- 31
-
UniProt Entry
- No entry found
-
Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial
-
Target Organism
- No MICs found in DRAMP database
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP04669.
Physicochemical Information
-
Formula
- C161H309N91O37
Absent Amino Acids
- CDEFHKLMNQVWY
Common Amino Acids
- R
Mass
- 4111.81
PI
- 13.28
Basic Residues
- 20
Acidic Residues
- 0
Hydrophobic Residues
- 3
Net Charge
- +20
-
Boman Index
- -304.26
Hydrophobicity
- -2.881
Aliphatic Index
- 19.03
Half Life
-
- Mammalian:4.4 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 0
Absorbance 280nm
- 0
Polar Residues
- 6
DRAMP04669
Comments Information
Comment
- No comments found on DRAMP database
Literature Information
- ·Literature 1
-
Title
- Modeling the surface of campylobacter fetus: Protein surface layer stability and resistance to cationic antimicrobial peptides.
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Pubmed ID
- 23122778
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Reference
- Biochim Biophys Acta. 2013 Mar;1828(3):1143-1152.
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Author
- Roberts JM, Graham LL, Quinn B, Pink DA.