General Information
-
DRAMP ID
- DRAMP18278
-
Peptide Name
- BacSJ(Bacteriocin)
-
Source
- Lactobacillus paracasei subsp. paracasei BGSJ2-8
-
Family
- Belongs to the class II bacteriocin
-
Gene
- Not found
-
Sequence
- YSYFGGSNGYSWRDKRGHWHYTVTKGGFETVIGIIGDGWGSAGAPGPGQH
-
Sequence Length
- 50
-
UniProt Entry
- No entry found
-
Protein Existence
Activity Information
-
Biological Activity
- Unknown
-
Target Organism
- No MICs found in DRAMP database
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- BLAST protein sequence homology search revealed that BacSJ showed a very high homology with acidocin M from L. acidophilus TK8912.
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP18278.
Physicochemical Information
-
Formula
- C245H341N69O70
Absent Amino Acids
- CLM
Common Amino Acids
- G
Mass
- 5372.82
PI
- 8.36
Basic Residues
- 7
Acidic Residues
- 3
Hydrophobic Residues
- 12
Net Charge
- +4
-
Boman Index
- -6159
Hydrophobicity
- -0.688
Aliphatic Index
- 39
Half Life
-
- Mammalian:2.8 hour
- Yeast:10 min
- E.coli:2 min
Extinction Coefficient Cystines
- 22460
Absorbance 280nm
- 458.37
Polar Residues
- 25
DRAMP18278
Comments Information
Comment
- No comments found on DRAMP database
Literature Information
- ·Literature 1
-
Title
- A SUCCESSFUL USE OF A NEW SHUTTLE CLONING VECTOR PA13 FOR THE CLONING OF THE BACTERIOCINS BACSJ and ACIDOCIN 8912
-
Pubmed ID
- PubMed ID is not available
-
Reference
- ARCHIVES OF BIOLOGICAL SCIENCES. 2010;62(2):231-243.
-
Author
- Kojic M,Lozo J,Jovcic B,Strahinic I,Fira D,Topisirovic L.