General Information
-
DRAMP ID
- DRAMP20885
-
Peptide Name
- Hp1404-T1a
-
Source
- Synthetic construct
-
Family
- Derived from Hp1404
-
Gene
- Not found
-
Sequence
- ILKKLWEGVKSI
-
Sequence Length
- 12
-
UniProt Entry
- No entry found
-
Protein Existence
- Synthetic
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram-
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Target Organism
-
- [Ref.29379033] Gram-negative bacteria: Pseudomonas aeruginosa 431 (MIC=25 μM), Pseudomonas aeruginosa 434 (MIC=25 μM), Pseudomonas aeruginosa 3399 (MIC=25 μM), Pseudomonas aeruginosa 3592 (MIC=12.5 μM), Pseudomonas aeruginosa 3904 (MIC=25 μM), Pseudomonas aeruginosa 4891 (MIC=25 μM), Pseudomonas aeruginosa 671973 (MIC=25 μM)
-
Hemolytic Activity
-
- [Ref.29379033] Hp1404-T1a does not induce substantial hemolysis, even at the high tested concentration (200μμM) against mouse red blood cells
-
Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
- Lipopolysaccharide (LPS)-binding
Structure Information
-
Linear/Cyclic
- Linear
-
N-terminal Modification
- Free
-
C-terminal Modification
- Amidation
-
Nonterminal Modifications and Unusual Amino Acids
- None
-
Stereochemistry
- L
-
Structure
- Alpha helix
-
Structure Description
- The peptide adopts an alpha-helical conformation in the membrane-mimicking environments and adopts a random coil conformation in the presence of all liposome types .
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Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- There is no predicted structure for DRAMP20885.
Physicochemical Information
-
Formula
- C68H116N16O16
Absent Amino Acids
- ACDFHMNPQRTY
Common Amino Acids
- K
Mass
- 1413.77
PI
- 9.7
Basic Residues
- 3
Acidic Residues
- 1
Hydrophobic Residues
- 6
Net Charge
- +2
-
Boman Index
- 13
Hydrophobicity
- 0.292
Aliphatic Index
- 154.17
Half Life
-
- Mammalian:20 hour
- Yeast:30 min
- E.coli:>10 hour
Extinction Coefficient Cystines
- 5500
Absorbance 280nm
- 500
Polar Residues
- 2
DRAMP20885
Comments Information
Function
- Antibacterial activity against the Gram-negative bacteria.
Literature Information
- ·Literature 1
-
Title
- Mechanisms driving the antibacterial and antibiofilm properties of Hp1404 and its analogue peptides against multidrug-resistant Pseudomonas aeruginosa.
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Pubmed ID
- 29379033
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Reference
- Sci Rep. 2018 Jan 29;8(1):1763.
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Author
- Kim MK, Kang HK, Ko SJ, Hong MJ, Bang JK, Seo CH, Park Y.