General Information
-
DRAMP ID
- DRAMP21031
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Peptide Name
- MyD5R (Derived from HD5)
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Source
- Synthetic construct
-
Family
- Not found
-
Gene
- Not found
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Sequence
- ATYRTGRATRESLSGVEISGRLYRLR
-
Sequence Length
- 26
-
UniProt Entry
- No entry found
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Protein Existence
- Synthetic form
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
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Target Organism
-
- [Ref.26206286]Gram-positive bacteria : Staphylococcus aureus (NCTC 8530)(MIC=7.5 μM), Bacillus subtilis (NCIM 2162)(MIC=20 μM);
- Gram-negative bacteria : Escherichia coli (MG 1655)(MIC=5 μM), Pseudomonas aeruginosa (NCTC 6750)(MIC=10 μM);
- Fungi : Candida albicans (ATCC 18804)(MIC=10 μM), Saccharomyces cerevisiae (BY4741)(MIC=20 μM)
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Hemolytic Activity
-
- [Ref.26206286] 23% hemolysis at 10 μM , 50% hemolysis at 20 μM , 75% hemolysis at 50 μM , 87.5% hemolysis at 100 μM against human red blood cells
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Cytotoxicity
-
- [Ref.26206286] No cytotoxic information found.
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Linear
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N-terminal Modification
- Acylation (Conjugated with myristic acid)
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C-terminal Modification
- Free
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Nonterminal Modifications and Unusual Amino Acids
- None
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Stereochemistry
- L
-
Structure
- Alpha helix, beta sheet, beta turn
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Structure Description
- Not found
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Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- There is no predicted structure for DRAMP21031.
Physicochemical Information
-
Formula
- C126H214N44O39
Absent Amino Acids
- CDFHKMNPQW
Common Amino Acids
- R
Mass
- 2969.36
PI
- 11.34
Basic Residues
- 6
Acidic Residues
- 2
Hydrophobic Residues
- 7
Net Charge
- +4
-
Boman Index
- -9117
Hydrophobicity
- -0.715
Aliphatic Index
- 78.85
Half Life
-
- Mammalian:4.4 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 2980
Absorbance 280nm
- 119.2
Polar Residues
- 11
DRAMP21031
Comments Information
Function
- Antibacterial activity against Gram-positive bacteria and Gram-negative bacteria, Antifungal activity agaist Candida albicans, Saccharomyces cerevisiae
Literature Information
- ·Literature 1
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Title
- Antimicrobial activity of human-defensin 5 and its linear analogs: N-terminal fatty acylation results in enhanced antimicrobial activity of the linear analogs
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Pubmed ID
- 26206286
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Reference
- Peptides. 2015 Sep;71:128-40. doi: 10.1016/j.peptides.2015.07.009. Epub 2015 Jul 20.
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Author
- Basil Mathew Ramakrishnan Nagaraj