General Information
-
DRAMP ID
- DRAMP28985
-
Peptide Name
- peptide 1 (Derived from Mag2)
-
Source
- Synthetic construct
-
Family
- N/A
-
Gene
- N/A
-
Sequence
- GIKKFLKSXKKFVKXFK
-
Sequence Length
- 17
-
UniProt Entry
- No entry found
-
Protein Existence
- Synthetic form
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-
-
Target Organism
-
- [Ref.33466998] Gram-positive bacteria: Staphylococcus aureus (MIC = 12.5 μM).
- Gram-negative bacteria: Escherichia coli (MIC = 3.125 μM), Pseudomonas aeruginosa (MIC = 3.125 μM), multiple-drug resistant P.aeruginosa (MIC = 3.125 μM)
-
Hemolytic Activity
-
- [Ref.33466998] It has hemolysis against human red blood cells at 50 μM
-
Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
Structure Information
-
Linear/Cyclic
- Linear
-
N-terminal Modification
- Free
-
C-terminal Modification
- Amidation
-
Nonterminal Modifications and Unusual Amino Acids
- The X (position: 9 and 15) in sequence indicate Aib residues (2-Aminoisobutyric acid)
-
Stereochemistry
- L
-
Structure
- α-helix in 20 mM PBS solution (pH = 7.4) with 1% SDS at peptide concentrations of 100 μM
-
Structure Description
- No detailed structure description
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP28985.
Physicochemical Information
-
Formula
- C91H148N22O15
Absent Amino Acids
- ACDEHMNPQRTWY
Common Amino Acids
- K
Mass
- 2049.01
PI
- 10.78
Basic Residues
- 7
Acidic Residues
- 0
Hydrophobic Residues
- 6
Net Charge
- +7
-
Boman Index
- -1849
Hydrophobicity
- -0.447
Aliphatic Index
- 62.94
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 0
Absorbance 280nm
- 0
Polar Residues
- 2
DRAMP28985
Comments Information
Function
- Antibacterial activity against Gram-positive and Gram-negative bacteria
Literature Information
- ·Literature 1
-
Title
- Development of Antimicrobial Stapled Peptides Based on Magainin 2 Sequence
-
Pubmed ID
- 33466998
-
Reference
- Molecules. 2021 Jan 16;26(2):444. doi: 10.3390/molecules26020444.
-
Author
- Motoharu Hirano, Chihiro Saito, Hidetomo Yokoo, Chihiro Goto, Ryuji Kawano, Takashi Misawa, Yosuke Demizu