General Information
-
DRAMP ID
- DRAMP29068
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Peptide Name
- CPF-2-1 (Variant of CPF-C1)
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Source
- Synthetic construct
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Family
- Not found
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Gene
- N/A
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Sequence
- kFwSLLkKAlrLwKkVL
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Sequence Length
- 17
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UniProt Entry
- No entry found
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Protein Existence
- Synthetic form
Activity Information
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Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+
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Target Organism
-
- [Ref.32590058] Gram-positive: S. aureus ATCC 25923 (MIC = 16 μg/mL, MIC = 16 μg/mL in 10% serum, MIC = 32 μg/mL in 150 mM)
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Hemolytic Activity
-
- [Ref.32590058]It showed almost no hemolytic activity, even at concentrations up to 128 μg/ml.
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Cytotoxicity
-
- Not found
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Binding Target
- Bacterial membrane
Structure Information
-
Linear/Cyclic
- Linear
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N-terminal Modification
- Free
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C-terminal Modification
- Amidation
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Nonterminal Modifications and Unusual Amino Acids
- Introduction of D-amino acid(s). (Look at 'Stereochemistry')
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Stereochemistry
- Mixed (D-Lys1, D-Trp3, D-Lys7, D-Leu10, D-Arg11, D-Trp13 and D-Lys15)
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Structure
- α-helical (most likely)
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Structure Description
- Not found
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Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- There is no predicted structure for DRAMP29068.
Physicochemical Information
-
Formula
- C108H177N27O19
Absent Amino Acids
- CDEGHIMNPQTY
Common Amino Acids
- KL
Mass
- 2157.76
PI
- 11.39
Basic Residues
- 6
Acidic Residues
- 0
Hydrophobic Residues
- 10
Net Charge
- +6
-
Boman Index
- -798
Hydrophobicity
- 0.071
Aliphatic Index
- 137.65
Half Life
-
- Mammalian:1.3 hour
- Yeast:3 min
- E.coli:2 min
Extinction Coefficient Cystines
- 11000
Absorbance 280nm
- 687.5
Polar Residues
- 1
DRAMP29068
Comments Information
Comment
- CPF-2 has potential as a lead compound to treat infections caused by S. aureus and MRSA, including the associated biofilms.
Literature Information
- ·Literature 1
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Title
- CPF-C1 analog with effective antimicrobial and antibiofilm activities against Staphylococcus aureus including MRSA
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Pubmed ID
- 32590058
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Reference
- Biochimie. 2020 Sep;176:1-11. doi: 10.1016/j.biochi.2020.06.003. Epub 2020 Jun 23.
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Author
- Xie J, Li Y, Guo X, Rao J, Yan T, Mou L, Wu X, Xie X, Yang W, Zhang B.