General Information
-
DRAMP ID
- DRAMP03286
-
Peptide Name
- Ostricacin-2 (Beta-defensin 1; Birds, animals)
-
Source
- Struthio camelus (Ostrich)
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Family
- Belongs to the beta-defensin family
-
Gene
- Not found
-
Sequence
- APGNKAECEREKGYCGFLKCSFPFVVSGKCSRFFFCCKNIW
-
Sequence Length
- 41
-
UniProt Entry
- P85114
-
Protein Existence
- Protein level
-
SMILES
- CC[C@@H](C)[C@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CCCCN)NC(=O)[C@@H]1CSSC[C@@H]2NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](Cc3ccccc3)NC(=O)CNC(=O)[C@@H]3CSSC[C@H](NC(=O)[C@H](CCCCN)NC(=O)CNC(=O)[C@H](CO)NC(=O)[C@H](C(C)C)NC(=O)[C@H](C(C)C)NC(=O)[C@H](Cc4ccccc4)NC(=O)[C@@H]4CCCN4C(=O)[C@H](Cc4ccccc4)NC(=O)[C@H](CO)NC2=O)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](Cc2ccccc2)C(=O)N[C@@H](Cc2ccccc2)C(=O)N[C@@H](Cc2ccccc2)C(=O)N[C@@H](CSSC[C@H](NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](C)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(N)=O)NC(=O)CNC(=O)[C@@H]2CCCN2C(=O)[C@H](C)N)C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CCCCN)C(=O)NCC(=O)N[C@@H](Cc2ccc(O)cc2)C(=O)N3)C(=O)N1)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)O
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
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Target Organism
-
- Gram-positive bacterium:
Target Organism Activity Staphylococcus aureus 1056-MRSA (MIC=1.25 µg/ml); - - Gram-negative bacterium:
Target Organism Activity Escherichia coli O157:H7 (MIC=0.96 µg/ml); - - Yeast:
Target Organism Activity Candida albicans 3153A MIC=6.2 µg/ml
- Gram-positive bacterium:
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Cyclic
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N-terminal Modification
- Free
-
C-terminal Modification
- Free
-
Nonterminal Modifications and Unusual Amino Acids
- Disulfide bonds between Cys8 and Cys36,Cys15 and Cys30,Cys20 and Cys37.
-
Stereochemistry
- L
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Structure
- Not found
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Structure Description
- Not found
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Predicted Structure
- There is no predicted structure for DRAMP03286.
Physicochemical Information
-
Formula
- C212H313N55O54S6
Absent Amino Acids
- DHMQT
Common Amino Acids
- CF
Mass
- 4688.51
PI
- 8.89
Basic Residues
- 7
Acidic Residues
- 3
Hydrophobic Residues
- 13
Net Charge
- +4
-
Boman Index
- -48.45
Hydrophobicity
- -0.081
Aliphatic Index
- 38.05
Half Life
-
- Mammalian:4.4 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 7365
Absorbance 280nm
- 184.13
Polar Residues
- 16
DRAMP03286
Comments Information
PTM
- Contains three disulfide bonds 8-36; 15-30; 20-37.
Literature Information
- ·Literature 1
-
Title
- Identification of three novel ostricacins: an update on the phylogenetic perspective of beta-defensins.
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Pubmed ID
- 16459058
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Reference
- Int J Antimicrob Agents. 2006 Mar;27(3):229-235.
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Author
- Sugiarto H, Yu PL.
