General Information

    • DRAMP ID

    • DRAMP20768

    • Peptide Name

    • Pore-forming peptide ameobapore C (EH-APP; Parasite, amoebozoa, protozoa, protists)

    • Source

    • Entamoeba histolytica

    • Family

    • Belongs to the amoebapore (amoebapore) family

    • Gene

    • Not found

    • Sequence

    • IPVLCPVCTSLVGKLIDLVLGGAVDKVTDYLETLCAKADGLVETLCTKIVSYGIDKLIEKILEGGSAKLICGLIHAC

    • Sequence Length

    • 77

    • Protein Existence

    • Protein level

Activity Information

    • Biological Activity

    • Antimicrobial, Antibacterial, Anti-Gram+, Antibiotic

    • Target Organism

      • [Ref.7715451] Gram-positive bacterium: Micrococcus luteus (MIC=5 μM, MBC=10 μM)

    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry

    • Cytotoxicity

      • Not included yet

    • Binding Target

    • Not found

Structure Information

    • Linear/Cyclic

    • Not included yet

    • N-terminal Modification

    • Not included yet

    • C-terminal Modification

    • Not included yet

    • Nonterminal Modifications and Unusual Amino Acids

    • Disulfide bonds between Cys5 and Cys77, Cys8 and Cys71, Cys35 and Cys46

    • Stereochemistry

    • Not included yet

    • Structure

    • Alpha helix

    • Structure Description

    • Not found

    • Helical Wheel Diagram

    • DRAMP20768 helical wheel diagram

    • PDB ID

    • None

    • Predicted Structure

Physicochemical Information

    • Formula

    • C360H610N86O106S6

    • Absent Amino Acids

    • FMNQRW

    • Common Amino Acids

    • L

    • Mass

    • 8031.68

    • PI

    • 5.12

    • Basic Residues

    • 8

    • Acidic Residues

    • 9

    • Hydrophobic Residues

    • 34

    • Net Charge

    • -1

    • Boman Index

    • 2221

    • Hydrophobicity

    • 0.858

    • Aliphatic Index

    • 142.99

    • Half Life

      • Mammalian:20 hour
      • Yeast:30 min
      • E.coli:>10 hour

    • Extinction Coefficient Cystines

    • 3355

    • Absorbance 280nm

    • 44.14

    • Polar Residues

    • 24

DRAMP20768

DRAMP20768 chydropathy plot

Comments Information

    • Function

    • Forms pores in the cytoplasmic membrane of host cells. Has antibacterial activity against M.luteus, no activity against E.coli. Implicated in the cytolytic activity of the parasite.

Literature Information

  • ·Literature 1

    • Title

    • Amoebapores, a family of membranolytic peptides from cytoplasmic granules of Entamoeba histolytica: isolation, primary structure, and pore formation in bacterial cytoplasmic membranes.

    • Reference

    • Mol Microbiol. 1994 Dec;14(5):895-904.

    • Author

    • Leippe M, Andrä J, Nickel R, Tannich E, Müller-Eberhard HJ.