General Information
-
DRAMP ID
- DRAMP00015
-
Peptide Name
- Geobacillin II (nisin analog; Bacteriocin)
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Source
- Geobacillus thermodenitrificans NG80-2 (Gram-positive bacteria)
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Family
- Belongs to the lantibiotic family (Class I bacteriocin)
-
Gene
- Not found
-
Sequence
- STIVCVSLRICNWSLRFCPSFKVRCPM
-
Sequence Length
- 27
-
UniProt Entry
- No entry found
-
Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+
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Target Organism
-
- Gram-positive bacteria: Bacillus cereus Z4222, Bacillus subtilis ATCC 6633.
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Cyclic
-
N-terminal Modification
- Free
-
C-terminal Modification
- Cyclization between S29 and C33
-
Nonterminal Modifications and Unusual Amino Acids
- Four lanthionines (S3-C7,S23-C27,S26-C30,S29-C33) and three β-methyllanthionines (T8-C11; T13-C18; T20-C24),S5 is dehydroalanines.
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Stereochemistry
- L
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- There is no predicted structure for DRAMP00015.
Physicochemical Information
-
Formula
- C139H225N39O34S5
Absent Amino Acids
- ADEGHQY
Common Amino Acids
- CS
Mass
- 3146.86
PI
- 9.37
Basic Residues
- 4
Acidic Residues
- 0
Hydrophobic Residues
- 10
Net Charge
- +4
-
Boman Index
- -25.56
Hydrophobicity
- 0.659
Aliphatic Index
- 90
Half Life
-
- Mammalian:1.9 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 5750
Absorbance 280nm
- 221.15
Polar Residues
- 10
DRAMP00015
Comments Information
Function
- Geobacillin II only demonstrated antimicrobial activity against Bacillus strains.
Literature Information
- ·Literature 1
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Title
- Lantibiotics from Geobacillus thermodenitrificans.
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Pubmed ID
- 22431611
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Reference
- Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5241-5246.
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Author
- Garg N, Tang W, Goto Y, Nair SK, van der Donk WA.