General Information
-
DRAMP ID
- DRAMP00187
-
Peptide Name
- LSEI_2386 (m2386; Bacteriocin)
-
Source
- Lactobacillus casei ATCC 334 (Gram-positive bacteria)
-
Family
- Belongs to the class IId bacteriocin
-
Gene
- Not found
-
Sequence
- DSIRDVSPTFNKIRRWFDGLFK
-
Sequence Length
- 22
-
UniProt Entry
- No entry found
-
Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram-
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Target Organism
-
- Gram-negative bacteria: Listeria innocua ATCC 33091 (++++), L. innocua CIP 78.44 (++++), Listeria monocytogens ATCC 19112 (+++++), Listeria welshimeri ATCC 43551 (+++++), Listeria seeligeri CIP79.46 (+++++).
- Note: ++++ clear inhibit zone with diameter 16-20 mm, and +++++ clear inhibit zone with diameter ≥20 mm.
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00187.
Physicochemical Information
-
Formula
- C124H189N35O33
Absent Amino Acids
- ACEHMQY
Common Amino Acids
- DFR
Mass
- 2698.08
PI
- 9.98
Basic Residues
- 5
Acidic Residues
- 3
Hydrophobic Residues
- 8
Net Charge
- +2
-
Boman Index
- -67.02
Hydrophobicity
- -0.686
Aliphatic Index
- 66.36
Half Life
-
- Mammalian:1.1 hour
- Yeast:3 min
- E.coli:>10 hour
Extinction Coefficient Cystines
- 5500
Absorbance 280nm
- 261.9
Polar Residues
- 5
DRAMP00187
Comments Information
Function
- mature LSEI_2386 was a putative pheromone peptide that also had significant bacteriocin activity against several Listeria species. The activities of both peptides tolerat 121°C for 30 min but not treatment with proteinase K or trypsin.
Literature Information
- ·Literature 1
-
Title
- Characterization of putative class II bacteriocins identified from a non-bacteriocin-producing strain Lactobacillus casei ATCC 334.
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Pubmed ID
- 22688903
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Reference
- Appl Microbiol Biotechnol. 2012 Jun 12.
-
Author
- Kuo YC, Liu CF, Lin JF, Li AC, Lo TC, Lin TH.