General Information
-
DRAMP ID
- DRAMP00254
-
Peptide Name
- Propionicin-F (Bacteriocin)
-
Source
- Propionibacterium freudenreichii subsp. Freudenreichii LMGT 2946 (Gram-positive bacteria)
-
Family
- Not found
-
Gene
- pcfA
-
Sequence
- WFYQGMNIAIYANIGGVANIIGYTEAAVATLLGAVVAVAPVVP
-
Sequence Length
- 43
-
UniProt Entry
- Q6E3K9
-
Protein Existence
- Protein level
-
SMILES
- CC[C@@H](C)[C@H](NC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CCSC)NC(=O)CNC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@@H](N)Cc1c[nH]c2ccccc12)[C@H](C)CC)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@H](C(=O)NCC(=O)NCC(=O)N[C@H](C(=O)N[C@@H](C)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@H](C(=O)N[C@H](C(=O)NCC(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@H](C(=O)N[C@@H](CCC(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(C)C)C(=O)NCC(=O)N[C@H](C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)O)C(C)C)C(C)C)C(=O)N[C@@H](C)C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N[C@H](C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)N[C@H](C(=O)O)C(C)C)C(C)C)C(C)C)[C@@H](C)O)C(C)C)[C@@H](C)O)[C@H](C)CC)[C@H](C)CC)C(C)C)[C@H](C)CC
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+
-
Target Organism
-
- Gram-positive bacteria:
Target Organism Activity Propionibacterium freudenreichii ssp. freudenreichii ATCC 6207T MIC=0.7 nM P. freudenreichii ssp.shermanii ATCC 9614T MIC=5.0 nM P. freudenreichii ATCC 9616 MIC=20 nM P. freudenreichii IFO12426 MIC=2.5 nM P. freudenreichii LMGT 2842 MIC=5.0 nM P. freudenreichii LMGT 3001 MIC=5.0 nM P. freudenreichii LMGT 2946 - P. freudenreichii LMGT 2956 - P. freudenreichii ISU-P24 MIC=0.7 nM P. freudenreichii ISU-P59 MIC=2.5 nM P. freudenreichii ISU-P83 MIC=5.0 nM P. freudenreichii ISU-P98 MIC=1.3 nM P. freudenreichii ISU-P104 MIC=0.2 nM
- Gram-positive bacteria:
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
- Not found
Structure Information
Physicochemical Information
-
Formula
- C206H318N48O55S
Absent Amino Acids
- CDHKRS
Common Amino Acids
- A
Mass
- 4379.14
PI
- 4
Basic Residues
- 0
Acidic Residues
- 1
Hydrophobic Residues
- 25
Net Charge
- -1
-
Boman Index
- 53.54
Hydrophobicity
- 1.198
Aliphatic Index
- 131.63
Half Life
-
- Mammalian:2.8 hour
- Yeast:3 min
- E.coli:2 min
Extinction Coefficient Cystines
- 9970
Absorbance 280nm
- 237.38
Polar Residues
- 13
DRAMP00254
Comments Information
Function
- Bacteriocin with specific antibacterial activity.
Literature Information
- ·Literature 1
-
Title
- Molecular and genetic characterization of propionicin F, a bacteriocin from Propionibacterium freudenreichii.
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Pubmed ID
- 15574930
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Reference
- Appl Environ Microbiol. 2004 Dec;70(12):7303-7310.
-
Author
- Brede DA, Faye T, Johnsborg O, Odeg¥rd I, Nes IF, Holo H.
