• DRAMP ID

    • DRAMP00425
    • Peptide Name

    • Tn-AFP1 (Trapa natans antifungal peptide; Plant defensin)
    • Source

    • Trapa natans
    • Family

    • Unknow
    • Gene

    • Unknow
    • Sequence

    • LMCTHPLDCSN
    • Sequence Length

    • 11
    • Swiss_Prot Entry

    • No entry found
    • Evidence code

    • Unknow
    • Biological Activity

    • Antifungal
    • Target Organism

      • Yeast: Candida tropicalis (MIC=32 µg/ml).
    • Binding Traget

    • Unknow
    • Structure

    • Unknow
    • Structure Description

    • Unknow
    • PDB ID

    • Unknow
    • DRAMP00425 helical wheel diagram
    • Formula

    • C49H80N14O17S3
    • Absent Amino Acids

    • AEFGIKQRVWY
    • Common Amino Acids

    • CL
    • Mass

    • 1412
    • PI

    • 5.29
    • Basic Residues

    • 1
    • Acidic Residues

    • 1
    • Hydrophobic Residues

    • 2
    • Boman Index

    • -11.24
    • Hydrophobicity

    • 10.91
    • Aliphatic Index

    • 70.91
    • Half Life

      • Mammalian:5.5 hour
      • Yeast:3 min
      • E.coli:2 min
    • Extinction Coefficient Cystines

    • 125
    • Absorbance 280nm

    • 12.5
    • Polar Residues

    • 5
browser doesn't support html5

Amino Acid Distribution

    • Function

    • Tn-AFP1 has no adverse effect on red blood cells at concentration of 32 μg/mL.
  • Literature 1
    • Reference

    • Peptides. 2011 Aug;32(8):1741-1747.
    • Author

    • Mandal SM, Migliolo L, Franco OL, Ghosh AK.
    • Title

    • Identification of an antifungal peptide from Trapa natans fruits with inhibitory effects on Candida tropicalis biofilm formation.