General Information
-
DRAMP ID
- DRAMP00441
-
Peptide Name
- Defensin Tk-AMP-D1 (Plant defensin)
-
Source
- Triticum kiharae (Wheat)
-
Family
- Belongs to the DEFL family
-
Gene
- Not found
-
Sequence
- RTCQSQSHKFKGACFSDTNCDSVCRTENFPRGQCNQHHVERKCYCERDC
-
Sequence Length
- 49
-
UniProt Entry
- P84963
-
Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
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Target Organism
-
- Fungi: Fusarium graminearum and Fusarium verticillioides (MIC<30 µg/ml).
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Bridge
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00441.
Physicochemical Information
-
Formula
- C231H358N80O77S8
Absent Amino Acids
- ILMW
Common Amino Acids
- C
Mass
- 5744.35
PI
- 8.21
Basic Residues
- 11
Acidic Residues
- 6
Hydrophobic Residues
- 6
Net Charge
- +5
-
Boman Index
- -184.4
Hydrophobicity
- -1.218
Aliphatic Index
- 13.88
Half Life
-
- Mammalian:1 hour
- Yeast:2 min
- E.coli:2 min
Extinction Coefficient Cystines
- 1990
Absorbance 280nm
- 41.46
Polar Residues
- 21
DRAMP00441
Comments Information
Function
- Has weak antifungal activity, but not against A. consortiale Botrytis cinerea, H. sativum, F. culmorum, C. graminicola and D. maydis.
PTM
- Contains four disulfide bonds 3-49; 14-34; 20-43; 24-45 (By similarity).
Literature Information
- ·Literature 1
-
Title
- Seed defensins from T. kiharae and related species: genome localization of defensin-encoding genes.
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Pubmed ID
- 17321030
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Reference
- Biochimie. 2007 May;89(5):605-612.
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Author
- Odintsova TI, Egorov TA, Musolyamov AKh, Odintsova MS, Pukhalsky VA, Grishin EV.
- ·Literature 2
-
Title
- Seed defensins of barnyard grass Echinochloa crusgalli (L.) Beauv.
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Pubmed ID
- 18625284
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Reference
- Biochimie. 2008 Nov-Dec;90(11-12):1667-1673.
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Author
- Odintsova TI, Rogozhin EA, Baranov Y, Musolyamov AKh, Yalpani N, Egorov TA, Grishin EV.