General Information
-
DRAMP ID
- DRAMP01015
-
Peptide Name
- VaD1 (Plant defensin)
-
Source
- Vigna angularis Kao Hsiung No.6 (Seeds)
-
Family
- Not found
-
Gene
- Not found
-
Sequence
- RTCMKKEGWGKCLIDTTCAHSCKNRGYIGGNCKGMTRTCYCLVNC
-
Sequence Length
- 45
-
UniProt Entry
- No entry found
-
Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
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Target Organism
-
- Fungi: Fusarium oxysporum, Fusarium oxysporum f. sp. Pisi.
- Gram-positive bacterium: Staphylococcus epidermidis;
- Gram-negative bacterium: Salmonella typhimurium.
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- 1TI5
- 1TI5-> 
-
Predicted Structure
- There is no predicted structure for DRAMP01015.
Physicochemical Information
-
Formula
- C205H337N65O61S10
Absent Amino Acids
- FPQ
Common Amino Acids
- C
Mass
- 5008.93
PI
- 9.06
Basic Residues
- 9
Acidic Residues
- 2
Hydrophobic Residues
- 7
Net Charge
- +7
-
Boman Index
- -80.71
Hydrophobicity
- -0.389
Aliphatic Index
- 43.33
Half Life
-
- Mammalian:1 hour
- Yeast:2 min
- E.coli:2 min
Extinction Coefficient Cystines
- 8980
Absorbance 280nm
- 204.09
Polar Residues
- 25
DRAMP01015
Comments Information
Comment
- No comments found on DRAMP database
Literature Information
- ·Literature 1
-
Title
- Cloning and characterization of a plant defensin VaD1 from Azuki Bean.
-
Pubmed ID
- 15713009
-
Reference
- J Agric Food Chem 2005; 53: 982-988.
-
Author
- Chen G.-H. et al. Chen, C.-S.