General Information
-
DRAMP ID
- DRAMP01643
-
Peptide Name
- Dermaseptin-5 (DShypo05, DS 01; Frogs, amphibians, animals)
-
Source
- Phyllomedusa hypochondrialis (Orange-legged leaf frog)
-
Family
- Not found
-
Gene
- Not found
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Sequence
- GLWSTIKQKGKEAAIAAAKAAGQAALGAL
-
Sequence Length
- 29
-
UniProt Entry
- P84600
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Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antiprotozoal
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Target Organism
-
- [Ref.8306981]Gram-negative bacterium: Escherichia coli (MIC=6.4 µM);
- Gram-positive bacterium: Staphylococcus aureus (MIC=3.2 µM).
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Hemolytic Activity
-
- [Ref:8306981]Non-hemolytic activity against rabbit red blood cells.
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Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Linear
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N-terminal Modification
- Free
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C-terminal Modification
- Amidation
-
Nonterminal Modifications and Unusual Amino Acids
- Free
-
Stereochemistry
- L
-
Structure
- Not found
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Structure Description
- Not found
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Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- Please click DRAMP01643_predicted_structure.pdb to download.
Physicochemical Information
-
Formula
- C125H212N36O36
Absent Amino Acids
- CDFHMNPRVY
Common Amino Acids
- A
Mass
- 2795.28
PI
- 10
Basic Residues
- 4
Acidic Residues
- 1
Hydrophobic Residues
- 16
Net Charge
- +3
-
Boman Index
- 2.73
Hydrophobicity
- 0.286
Aliphatic Index
- 101.72
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 5500
Absorbance 280nm
- 196.43
Polar Residues
- 6
DRAMP01643
Comments Information
Function
- Has antibacterial activity against Gram-negative bacteria and Gram-positive bacteria. Also has antiprotozoal activity against L. amazonensis. No hemolytic activity.
Tissue specificity
- Expressed by the skin glands.
PTM
- C-terminal amidation.
Literature Information
- ·Literature 1
-
Title
- Dermaseptins from Phyllomedusa oreades and Phyllomedusa distincta. Anti-Trypanosoma cruzi activity without cytotoxicity to mammalian cells.
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Pubmed ID
- 12379643
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Reference
- J Biol Chem. 2002 Dec 20;277(51):49332-49340.
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Author
- Brand GD, Leite JR, Silva LP, Albuquerque S, Prates MV, Azevedo RB, Carregaro V, Silva JS, Sá VC, Brandão RA, Bloch C Jr.
- ·Literature 2
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Title
- Dermaseptins from Phyllomedusa oreades and Phyllomedusa distincta: Secondary structure, antimicrobial activity, and mammalian cell toxicity.
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Pubmed ID
- 17442605
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Reference
- Comp Biochem Physiol A Mol Integr Physiol. 2008 Nov;151(3):336-343.
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Author
- Leite JRSA, Brand GD, Silva LP, Kückelhaus SAS, Bento WRC, Araújo ALT, Martins GR, Lazzari AM, Bloch C Jr.