General Information
-
DRAMP ID
- DRAMP02438
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Peptide Name
- Halocyntin
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Source
- Halocynthia papillosa (Red sea-squirt)
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Family
- Not found
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Gene
- Not found
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Sequence
- FWGHIWNAVKRVGANALHGAVTGALS
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Sequence Length
- 26
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UniProt Entry
- P86415
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Protein Existence
- Protein level
Activity Information
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Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-
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Target Organism
-
- [Ref.19085906]Gram-positive bacteria (Native, Synthetic): Micrococcus luteus A270 (MBC=0.39-0.78, 0.39-0.78 µM), Aerococcus viridans 54.145 T (MBC=3.13-6.25, 0.78-1.56 µM), Bacillus megaterium 66.20 T (MBC=0.75-1.56, 0.39-0.78 µM), Staphylococcus aureus 65.8 T (MBC=6.25-12.50, 1.56-3.13 µM), Enterococcus faecalis 103015 T (MBC=6.25-12.50, 1.56-3.13 µM);
- Gram-negative bacteria (Native, Synthetic): Enterobacter aerogenes 30.86 T (MBC=25-50, 6.25-12.50 µM), Pseudomonas aeruginosa 100720 T (MBC>100, 25-50 µM), Salmonella thyphimurium 60.62 T (MBC=50-100, 12.50-25 µM), Klebsiella pneumoniae 82.91 T (MBC=12.50-25, 1.56-3.13 µM), Neisseria gonorrhoeae 103711 (MBC=25-50, ND µM), Escherichia coli (MBC=6.25-12.50, 6.25-12.50 µM).
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Hemolytic Activity
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- [Ref.19085906]8% hemolytic activity at 6.25 μM, 13% hemolytic activity at 12.5 μM, 14% hemolytic activity at 25 μM, 22% hemolytic activity at 50 μM against sheep erythrocytes
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Cytotoxicity
-
- Not included yet
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Binding Target
- Not found
Structure Information
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Linear/Cyclic
- Not included yet
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N-terminal Modification
- Not included yet
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C-terminal Modification
- Not included yet
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Nonterminal Modifications and Unusual Amino Acids
- Not included yet
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Stereochemistry
- Not included yet
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Structure
- Not found
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Structure Description
- Not found
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Helical Wheel Diagram
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PDB ID
- None
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Predicted Structure
- There is no predicted structure for DRAMP02438.
Physicochemical Information
-
Formula
- C126H190N38O31
Absent Amino Acids
- CDEMPQY
Common Amino Acids
- A
Mass
- 2733.13
PI
- 11
Basic Residues
- 4
Acidic Residues
- 0
Hydrophobic Residues
- 14
Net Charge
- +4
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Boman Index
- -1.71
Hydrophobicity
- 0.377
Aliphatic Index
- 97.69
Half Life
-
- Mammalian:1.1 hour
- Yeast:3 min
- E.coli:2 min
Extinction Coefficient Cystines
- 11000
Absorbance 280nm
- 440
Polar Residues
- 8
DRAMP02438
Comments Information
Function
- Has strong antibacterial activity against the Gram-positive bacteria M. luteus, S. aureus, B. megaterium, A. viridans and E. faecalis, and against the Gram-negative bacterium K. pneumoniae. Has less potent antibacterial activity against the Gram-negative bacteria E. coli DH5alpha, S. typhimurium, P. aeruginosa, E. aerogenes and N. gonorrhoeae. Has moderate hemolytic activity against sheep erythrocytes.
Literature Information
- ·Literature 1
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Title
- Halocyntin and papillosin, two new antimicrobial peptides isolated from hemocytes of the solitary tunicate, Halocynthia papillosa.
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Pubmed ID
- 19085906
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Reference
- J Pept Sci. 2009 Jan;15(1):48-55.
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Author
- Galinier R, Roger E, Sautiere PE, Aumelas A, Banaigs B, Mitta G.